Apple Crumble Cupcakes Recipe
There’s something truly magical about Apple Crumble Cupcakes that makes them a standout treat for any occasion. Imagine biting into a cupcake where the softness of a spiced, moist cake mingles perfectly with warm, tender apple filling and a golden, buttery crumble topping that adds just the right amount of crunch. These Apple Crumble Cupcakes capture all the cozy flavors of a classic apple dessert but in a fun, handheld form that’s absolutely irresistible. Whether you’re a longtime fan of apple desserts or new to this delightful combination, these cupcakes will quickly become a cherished favorite in your baking repertoire.

Ingredients You’ll Need
Gathering the right ingredients is the first step to baking perfect Apple Crumble Cupcakes. Each item contributes something special—flour and butter create tender cake and crumble textures, spices add warmth and depth, and fresh apples bring that juicy, fruity punch that defines the flavor.
- All-purpose flour: The foundation for both the cupcake and crumble, providing structure and a tender crumb.
- Light brown sugar: Adds rich sweetness with a hint of molasses, essential for that classic crumble flavor.
- Ground cinnamon: Infuses warm, cozy spice that perfectly complements the apples.
- Ground nutmeg: Just a pinch adds subtle complexity and autumnal flair.
- Unsalted butter: Both softened for the cupcake batter and cold for the crumble, it’s key to moistness and crumbly texture.
- Apples (Honeycrisp, Gala, or Fuji): Peeled, diced, and bursting with fresh fruit flavor to keep every bite juicy.
- Granulated sugar: Sweetens the apple filling and cupcake batter, balancing tartness perfectly.
- Lemon juice: Keeps the apple filling bright and prevents browning, enhancing fresh flavor.
- Baking powder and baking soda: Help the cupcakes rise beautifully to a light, airy texture.
- Salt: Enhances all the flavors — never skip it!
- Eggs: Bind the ingredients together and add richness to the cupcakes.
- Vanilla extract: Brings a sweet, fragrant background note that lifts the entire cupcake.
- Sour cream or plain yogurt: Adds moisture and a slight tang for balance in the batter.
- Milk: Lightens the batter and ensures a tender crumb.
- Optional toppings (caramel sauce, powdered sugar): For an extra touch of decadence and presentation flair.
How to Make Apple Crumble Cupcakes
Step 1: Prepare the Crumble Topping
Start by mixing the dry ingredients—flour, brown sugar, cinnamon, and nutmeg—in a bowl. Then, cut in cold, cubed butter using a pastry blender or your fingers until the mixture looks like coarse crumbs, with little butter chunks still visible. This texture is the secret to that perfect crumble crunch. Chill the topping in the fridge while you work on the apples and cupcake batter to keep the butter from melting too soon.
Step 2: Make the Apple Filling
Peel, core, and dice your apples into small pieces. Toss them with granulated sugar, lemon juice, cinnamon, nutmeg, and a touch of flour. The sugar sweetens, the lemon juice brightens and prevents browning, and the flour helps thicken the juice released during baking. This filling brings that luscious, tender fruit center that makes Apple Crumble Cupcakes so comforting.
Step 3: Bake the Cupcake Batter
The cupcake base starts with creaming softened butter and sugar until light and fluffy—this is your ticket to a moist and airy texture. Add eggs one at a time, then mix in vanilla extract. Alternate adding the dry ingredients (flour, baking powder, baking soda, salt) with milk and sour cream to create a batter that’s smooth, thick, and perfectly balanced.
Step 4: Assemble and Bake
Fill cupcake liners about halfway with batter, add a spoonful of apple filling to the center, then top with the remaining batter. Finally, generously sprinkle the chilled crumble topping on each cupcake. Bake until the tops are golden and a toothpick inserted in the cake (avoiding the apple bits) comes out clean. The combination of tender cake, juicy apples, and crunchy crumble is simply dreamy.
How to Serve Apple Crumble Cupcakes

Garnishes
Apple Crumble Cupcakes are stunning as they are, but adding a drizzle of warm caramel sauce or a light dusting of powdered sugar immediately ups the wow factor. These finishing touches add sweetness or a touch of elegance that makes serving them irresistible whether it’s a casual snack or dessert for guests.
Side Dishes
These cupcakes pair wonderfully with a scoop of vanilla ice cream or a dollop of freshly whipped cream for an extra indulgent treat. For a lighter option, consider serving with a hot cup of chai tea or a spiced latte to complement the autumnal flavors of the cupcakes perfectly.
Creative Ways to Present
If you’re looking to impress, serve the Apple Crumble Cupcakes on a rustic wooden board or a pretty cake stand sprinkled with cinnamon. You can also place a small apple fan or cinnamon stick on the side of each cupcake for a delightful visual touch and an enhanced sensory experience.
Make Ahead and Storage
Storing Leftovers
Once cooled, Apple Crumble Cupcakes keep beautifully stored in an airtight container at room temperature for up to two days. This ensures they stay moist and preserve that crunchy crumble texture. Beyond this, refrigeration can help extend freshness but may slightly soften the crumble topping.
Freezing
You can freeze the cupcakes either with or without the crumble topping. For best results, wrap each cupcake individually in plastic wrap and place in a freezer-safe container. Frozen Apple Crumble Cupcakes stay delicious for up to three months. Thaw at room temperature before enjoying.
Reheating
To bring back that just-baked warmth, reheat the cupcakes in a preheated oven at 325°F (165°C) for about 10 minutes. This revives the crumble’s crunch and warms the spiced apple filling, creating an experience close to fresh out of the oven.
FAQs
Can I use other types of apples for these cupcakes?
Absolutely! Apples like Granny Smith, Braeburn, or Pink Lady will also work well. Just remember that tart apples will offer a tangier filling, so adjust the sugar to your preference.
Do I have to use sour cream, or can I substitute it?
If you don’t have sour cream, plain Greek yogurt or buttermilk are excellent substitutes. They add moisture and tenderness while keeping the flavor balanced.
Can I make the crumble topping ahead of time?
Yes, you can prepare the crumble topping a day in advance and keep it in the refrigerator. Just keep it chilled until you’re ready to bake to maintain that perfect buttery texture.
How do I prevent the apples from making the cupcakes soggy?
Coating the diced apples with a little flour before folding them into the filling helps absorb excess juices during baking, keeping the cupcakes nice and tender without sogginess.
Is it possible to make these cupcakes gluten-free?
You can try substituting the all-purpose flour with a gluten-free flour blend designed for baking. Keep in mind that the texture may vary slightly, but the flavor will remain delightful.
Final Thoughts
Whenever you need a cozy, joyful baking project that fills your kitchen with warm, inviting aromas, Apple Crumble Cupcakes are the answer. They combine the best parts of a beloved dessert into the perfect personal treat that’s simple to make and impossible to resist. So grab those apples and start baking — your friends and family will thank you for sharing these little bites of fall happiness!
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PrintApple Crumble Cupcakes Recipe
Apple Crumble Cupcakes are a delightful fall-inspired treat that combines the warm, spiced flavors of traditional apple crumble with the convenience and charm of a cupcake. Featuring a moist cinnamon-spiced cupcake base, a tender apple filling, and a buttery, crunchy crumble topping, these cupcakes capture the essence of autumn in every bite, perfect for cozy gatherings or an indulgent afternoon snack.
- Prep Time: 25 minutes
- Cook Time: 25 minutes
- Total Time: 50 minutes
- Yield: 12 cupcakes 1x
- Category: Dessert
- Method: Baking
- Cuisine: American
- Diet: Vegetarian
Ingredients
Crumble Topping
- 1 cup all-purpose flour
- 1/2 cup packed light brown sugar
- 1/2 teaspoon ground cinnamon
- 1/4 teaspoon ground nutmeg
- 1/2 cup (1 stick) cold unsalted butter, cut into small cubes
Apple Filling
- 3 medium apples (Honeycrisp, Gala, or Fuji), peeled, cored, and diced
- 2 tablespoons granulated sugar
- 1 tablespoon lemon juice
- 1 teaspoon ground cinnamon
- 1/4 teaspoon ground nutmeg
- 1 tablespoon all-purpose flour
Cupcakes
- 1 1/2 cups all-purpose flour
- 1 1/2 teaspoons baking powder
- 1/4 teaspoon baking soda
- 1/4 teaspoon salt
- 1/2 cup (1 stick) unsalted butter, softened
- 3/4 cup granulated sugar
- 2 large eggs
- 1 teaspoon vanilla extract
- 1/2 cup sour cream or plain yogurt
- 1/4 cup milk
Optional
- Caramel sauce, for drizzling
- Powdered sugar, for dusting
Instructions
- Prepare Crumble Topping: In a medium bowl, whisk together the flour, brown sugar, cinnamon, and nutmeg until combined. Add cold, cubed butter and use a pastry blender or fingertips to cut the butter into the mixture until it resembles coarse crumbs with visible small butter pieces. Cover and refrigerate to keep the butter cold.
- Make Apple Filling: In a bowl, toss diced apples with granulated sugar, lemon juice, cinnamon, nutmeg, and flour to coat evenly. Set aside to let the flavors meld.
- Preheat Oven and Prepare Pan: Preheat your oven to 350°F (175°C). Line a muffin tin with cupcake liners or grease it lightly.
- Mix Dry Ingredients for Cupcakes: In a separate bowl, whisk together the all-purpose flour, baking powder, baking soda, and salt. Set aside.
- Cream Butter and Sugar: In a large bowl, use an electric mixer to cream the softened butter and granulated sugar together until light and fluffy, about 3-4 minutes.
- Add Eggs and Vanilla: Beat in the eggs one at a time, ensuring each is fully incorporated before adding the next. Mix in vanilla extract.
- Add Sour Cream and Milk: Mix in the sour cream (or plain yogurt) and milk until the batter is smooth.
- Combine Wet and Dry Ingredients: Gradually add the dry flour mixture to the wet ingredients, folding gently until just combined. Avoid overmixing to keep cupcakes tender.
- Assemble Cupcakes: Spoon a tablespoon of cupcake batter into each muffin cup. Add about a teaspoon of the apple filling on top of the batter in each cup, then cover with more batter to fill about 2/3 full. Finish by sprinkling an ample pinch of the crumble topping over each cupcake.
- Bake: Bake in preheated oven for 20-25 minutes or until a toothpick inserted in the cupcake portion (not apple) comes out clean and the crumble topping is golden brown.
- Cool and Serve: Let cupcakes cool in the pan for 5 minutes before transferring to a wire rack to cool completely. Optionally drizzle with caramel sauce and dust with powdered sugar before serving.
Notes
- Use tart or sweet apple varieties such as Honeycrisp, Gala, or Fuji for best flavor and texture.
- Keep the butter cold when making the crumble topping to ensure a crunchy texture after baking.
- Do not overmix the cupcake batter to keep the cupcakes tender.
- These cupcakes can be stored in an airtight container at room temperature for up to 2 days or refrigerated for up to 4 days.
- Reheat gently before serving to revive the crumble crunch, or serve at room temperature.
- For a dairy-free option, substitute butter with vegan margarine and use plant-based yogurt and milk.
Nutrition
- Serving Size: 1 cupcake
- Calories: 320 kcal
- Sugar: 22 g
- Sodium: 180 mg
- Fat: 15 g
- Saturated Fat: 9 g
- Unsaturated Fat: 5 g
- Trans Fat: 0.2 g
- Carbohydrates: 42 g
- Fiber: 2 g
- Protein: 3 g
- Cholesterol: 55 mg
Keywords: apple crumble, cupcakes, fall dessert, autumn recipe, spiced apple cupcakes, crumble topping, cozy dessert

