PUMPKIN CREAM CHEESE SWIRL MUFFINS Recipe
If you’re craving a fall treat that perfectly balances moist, spiced pumpkin with luscious, tangy cream cheese in every bite, these PUMPKIN CREAM CHEESE SWIRL MUFFINS are here to deliver. They’re a little piece of comfort wrapped up in a muffin liner—bright orange pumpkin batter mingling with velvety cream cheese swirls that make each muffin tender, flavorful, and utterly addictive. Perfect for breakfast, snack time, or even a cozy afternoon coffee date, these muffins bring together classic autumn spices and a creamy surprise that you’ll find yourself reaching for again and again.

Ingredients You’ll Need
These ingredients are simple and familiar, but each one plays a crucial role in making these muffins shine. The pumpkin puree gives moisture and that signature autumnal color, while the spices create warmth and depth. The cream cheese swirl adds a smooth tang that makes these muffins truly special.
- All-purpose flour: The backbone for structure and crumb, it keeps the muffins tender yet sturdy.
- Granulated sugar: Adds sweetness and helps create a moist texture in the pumpkin batter.
- Brown sugar: Brings a rich, caramel-like depth that complements the pumpkin flavor beautifully.
- Baking soda: Works as a leavening agent to give your muffins a light lift.
- Salt: Enhances all the flavors, balancing sweetness and spice.
- Ground cinnamon: A classic pumpkin pie spice, it fills the muffins with cozy warmth.
- Ground nutmeg: Adds a subtle nutty sweetness that pairs perfectly with cinnamon.
- Ground cloves: Provides a hint of pungent spice for complexity.
- Ground ginger: Brings a gentle zing that brightens the flavor profile.
- Large eggs: Bind the ingredients and add richness to the batter.
- Pumpkin puree: The star ingredient, delivering moisture, earthy sweetness, and that unmistakable orange hue.
- Vegetable oil: Ensures moistness and tenderness in every bite.
- Milk: Lightens the batter and perfectly balances the texture.
- Vanilla extract: Lends a warm fragrance enhancing both pumpkin and cream cheese notes.
- Cream cheese (softened): Creates the irresistible creamy swirl that adds tang and richness.
- Granulated sugar (for cream cheese): Sweetens the cream cheese mixture without overpowering it.
- Egg yolk: Adds silkiness to the cream cheese swirl, making it extra smooth.
How to Make PUMPKIN CREAM CHEESE SWIRL MUFFINS
Step 1: Prepare Your Oven and Muffin Tin
Start by preheating your oven to 375°F (190°C). Line a 12-cup muffin tin with paper liners or lightly spray with non-stick cooking spray—this small step ensures your muffins pop right out without sticking, keeping them picture-perfect.
Step 2: Mix the Dry Ingredients
In a large bowl, whisk together the flour, both sugars, baking soda, salt, and those cozy spices: cinnamon, nutmeg, cloves, and ginger. Taking a moment to blend these evenly means every bite bursts with perfectly balanced spice.
Step 3: Combine the Wet Ingredients
In another bowl, whisk the eggs, pumpkin puree, vegetable oil, milk, and vanilla extract until smooth and combined. This mixture is where the magic begins—the pumpkin puree gives moisture and a lovely vibrant color that hints at what’s coming.
Step 4: Bring Wet and Dry Together
Pour the wet pumpkin mixture into the dry ingredients and gently stir until just combined; be careful not to overmix. This keeps your muffins tender and soft rather than tough or dense.
Step 5: Prepare the Cream Cheese Swirl
Beat the softened cream cheese with granulated sugar, egg yolk, and vanilla extract until silky smooth. This luscious mixture will create the beautiful creamy swirls that give these muffins their signature look and delightful tang.
Step 6: Fill and Swirl
Spoon the pumpkin batter into each muffin cup, filling about two-thirds full. Then add a dollop of the cream cheese mixture on top of each and use a toothpick to swirl it through the batter—this step adds fun and artistry while ensuring every bite carries a creamy surprise.
Step 7: Bake to Perfection
Place your muffin tin in the oven and bake for 18 to 20 minutes. You’ll know they’re done when a toothpick inserted into a muffin comes out clean. Once baked, let them cool in the tin for five minutes before transferring to a wire rack to cool completely. This resting time helps the flavors set and makes them easier to handle.
How to Serve PUMPKIN CREAM CHEESE SWIRL MUFFINS

Garnishes
For an extra special touch, sprinkle a little cinnamon sugar on top just before baking, or add chopped pecans or walnuts for crunch. Another lovely option is to drizzle a bit of maple glaze on warm muffins to amp up the autumn vibes.
Side Dishes
These muffins pair beautifully with a cup of freshly brewed coffee, chai tea, or a steaming mug of hot apple cider. For a fuller breakfast, serve alongside scrambled eggs or yogurt topped with granola and fresh fruit—balanced flavors and textures round out your meal!
Creative Ways to Present
Try slicing the cooled PUMPKIN CREAM CHEESE SWIRL MUFFINS in half and lightly toasting them, then spreading a thin layer of butter or cream cheese to accentuate that swirl’s creaminess. They also make adorable mini dessert cups when served with whipped cream and a dusting of cinnamon on top.
Make Ahead and Storage
Storing Leftovers
Store leftover muffins in an airtight container at room temperature for up to two days. Beyond that, refrigerating them is best to maintain freshness, especially because of the cream cheese swirl.
Freezing
You can freeze these muffins for up to three months. Wrap each muffin tightly in plastic wrap then place in a freezer-safe bag or container. When you want a quick treat, simply thaw them at room temperature or in the fridge overnight.
Reheating
To warm up chilled or frozen muffins, pop them in a microwave for 20 to 30 seconds or in a toaster oven until heated through. Enjoy them warm to really bring out the cozy pumpkin and rich cream cheese flavors.
FAQs
Can I use fresh pumpkin instead of canned pumpkin puree?
Absolutely! Just make sure to cook and puree fresh pumpkin until smooth, removing as much moisture as possible; canned pumpkin puree is more concentrated and consistent, so adjustments may be needed.
What if I don’t have all the pumpkin pie spices on hand?
You can simplify by using just cinnamon—it’s the dominant and most essential spice. However, using the full blend (cinnamon, nutmeg, cloves, ginger) creates the classic warm flavor profile.
Can I substitute cream cheese with something else?
While cream cheese gives that iconic tangy swirl, you can try mascarpone for a milder, creamier texture or even Greek yogurt for a lighter version, though the texture and flavor will be slightly different.
Are these muffins freezer-friendly once baked?
Yes! Baked PUMPKIN CREAM CHEESE SWIRL MUFFINS freeze beautifully, making them a great make-ahead snack or breakfast option to grab whenever the craving hits.
Can I make these muffins gluten-free?
Sure! Substitute the all-purpose flour with a gluten-free blend designed for baking. Just be aware the texture might vary slightly, but the delicious pumpkin and cream cheese swirl will still shine.
Final Thoughts
There’s just something so incredibly comforting about these PUMPKIN CREAM CHEESE SWIRL MUFFINS that makes them a forever fall favorite. Whether you bake a batch for yourself or share with friends and family, they bring warmth, flavor, and a touch of indulgence to any moment. Trust me, once you try this recipe, it’ll become a go-to treat that brightens your mornings and sweetens your afternoons year after year.
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PrintPUMPKIN CREAM CHEESE SWIRL MUFFINS Recipe
These Pumpkin Cream Cheese Swirl Muffins combine the rich, autumnal flavors of pumpkin and warm spices with a luscious, creamy cheese swirl. Perfectly moist and tender, these muffins are ideal for breakfast, snack, or dessert during the fall season or any time you crave something cozy and flavorful.
- Prep Time: 20 minutes
- Cook Time: 20 minutes
- Total Time: 40 minutes
- Yield: 12 muffins 1x
- Category: Breakfast, Snack, Dessert
- Method: Baking
- Cuisine: American
- Diet: Vegetarian
Ingredients
For the Muffins:
- 1 3/4 cups all-purpose flour
- 1 cup granulated sugar
- 1/2 cup brown sugar
- 1 teaspoon baking soda
- 1/2 teaspoon salt
- 2 teaspoons ground cinnamon
- 1/2 teaspoon ground nutmeg
- 1/2 teaspoon ground cloves
- 1/2 teaspoon ground ginger
- 2 large eggs
- 1 can (15 oz) pumpkin puree
- 1/2 cup vegetable oil
- 1/4 cup milk
- 1 teaspoon vanilla extract
For the Cream Cheese Swirl:
- 8 oz cream cheese, softened
- 1/4 cup granulated sugar
- 1 large egg yolk
- 1/2 teaspoon vanilla extract
Instructions
- Preheat the oven: Set your oven to 375°F (190°C). Prepare a 12-cup muffin tin by lining it with paper liners or spraying it with non-stick cooking spray to prevent sticking.
- Mix dry ingredients: In a large bowl, whisk together the all-purpose flour, granulated sugar, brown sugar, baking soda, salt, ground cinnamon, nutmeg, cloves, and ginger until evenly combined.
- Mix wet ingredients: In a separate medium bowl, whisk together the eggs, pumpkin puree, vegetable oil, milk, and vanilla extract until the mixture is smooth and homogenous.
- Combine wet and dry ingredients: Pour the wet ingredients into the bowl with the dry ingredients and gently stir until just combined. Do not overmix to keep the muffins tender.
- Prepare cream cheese swirl: In a small bowl, beat the softened cream cheese with granulated sugar, egg yolk, and vanilla extract until the mixture is smooth and creamy.
- Fill muffin cups and add swirl: Spoon the pumpkin batter into each muffin cup until about two-thirds full. Then add a spoonful of the cream cheese mixture on top of each and use a toothpick or knife to swirl the cream cheese gently into the pumpkin batter to create a marbled effect.
- Bake the muffins: Place the muffin tin in the preheated oven and bake for 18-20 minutes, or until a toothpick inserted into the center comes out clean or with just a few moist crumbs.
- Cool: Allow muffins to cool in the tin for 5 minutes to firm up, then transfer them to a wire rack to cool completely before serving.
Notes
- Use canned pumpkin puree, not pumpkin pie filling, to avoid added sugars and spices.
- Make sure the cream cheese is softened to ensure smooth mixing for the swirl.
- Swirling too much can cause the cream cheese to blend fully; aim for gentle marbling.
- Store leftover muffins in an airtight container at room temperature for up to 3 days or refrigerate for up to a week.
- For a dairy-free option, substitute cream cheese with a vegan cream cheese alternative and use plant milk.
Nutrition
- Serving Size: 1 muffin
- Calories: 280 kcal
- Sugar: 20 g
- Sodium: 210 mg
- Fat: 15 g
- Saturated Fat: 5 g
- Unsaturated Fat: 9 g
- Trans Fat: 0 g
- Carbohydrates: 33 g
- Fiber: 2 g
- Protein: 4 g
- Cholesterol: 60 mg
Keywords: pumpkin muffins, cream cheese swirl, autumn recipes, fall baking, pumpkin dessert, spiced muffins

